The European Southern Observatory (ESO) is studying the next generation giant telescope, called the European Extremely Large Telescope (E-ELT). With a 42 m diameter primary mirror, it is a significant step from currently existing telescopes. Therefore, the E-ELT with its instruments poses new challenges in terms of cost and computational complexity for the control system, including its adaptive optics (AO). Since the conventional matrix-vector multiplication (MVM) method successfully used so far for AO wavefront reconstruction cannot be efficiently scaled to the size of the AO systems on the E-ELT, faster algorithms are needed. Among those recently developed wavefront reconstruction algorithms, three are studied in this paper from the point of view of design, implementation, and absolute speed on three multicore multi-CPU platforms. We focus on a single-conjugate AO system for the E-ELT. The algorithms are the MVM, the Fourier transform reconstructor (FTR), and the fractal iterative method (FRiM). This study enhances the scaling of these algorithms with an increasing number of CPUs involved in the computation. We discuss implementation strategies, depending on various CPU architecture constraints, and we present the first quantitative execution times so far at the E-ELT scale. MVM suffers from a large computational burden, making the current computing platform undersized to reach timings short enough for AO wavefront reconstruction. In our study, the FTR provides currently the fastest reconstruction. FRiM is a recently developed algorithm, and several strategies are investigated and presented here in order to implement it for real-time AO wavefront reconstruction, and to optimize its execution time. The difficulty to parallelize the algorithm in such architecture is enhanced. We also show that FRiM can provide interesting scalability using a sparse matrix approach.