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Biomedical Optics Express

Biomedical Optics Express

  • Editor: Joseph A. Izatt
  • Vol. 4, Iss. 10 — Oct. 1, 2013
  • pp: 1946–1963

Perturbation Monte Carlo methods for tissue structure alterations

Jennifer Nguyen, Carole K. Hayakawa, Judith R. Mourant, and Jerome Spanier  »View Author Affiliations


Biomedical Optics Express, Vol. 4, Issue 10, pp. 1946-1963 (2013)
http://dx.doi.org/10.1364/BOE.4.001946


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Abstract

This paper describes an extension of the perturbation Monte Carlo method to model light transport when the phase function is arbitrarily perturbed. Current perturbation Monte Carlo methods allow perturbation of both the scattering and absorption coefficients, however, the phase function can not be varied. The more complex method we develop and test here is not limited in this way. We derive a rigorous perturbation Monte Carlo extension that can be applied to a large family of important biomedical light transport problems and demonstrate its greater computational efficiency compared with using conventional Monte Carlo simulations to produce forward transport problem solutions. The gains of the perturbation method occur because only a single baseline Monte Carlo simulation is needed to obtain forward solutions to other closely related problems whose input is described by perturbing one or more parameters from the input of the baseline problem. The new perturbation Monte Carlo methods are tested using tissue light scattering parameters relevant to epithelia where many tumors originate. The tissue model has parameters for the number density and average size of three classes of scatterers; whole nuclei, organelles such as lysosomes and mitochondria, and small particles such as ribosomes or large protein complexes. When these parameters or the wavelength is varied the scattering coefficient and the phase function vary. Perturbation calculations give accurate results over variations of ∼15–25% of the scattering parameters.

© 2013 OSA

OCIS Codes
(170.0170) Medical optics and biotechnology : Medical optics and biotechnology
(170.3660) Medical optics and biotechnology : Light propagation in tissues
(170.6510) Medical optics and biotechnology : Spectroscopy, tissue diagnostics
(170.6935) Medical optics and biotechnology : Tissue characterization

ToC Category:
Optics of Tissue and Turbid Media

History
Original Manuscript: June 19, 2013
Revised Manuscript: August 2, 2013
Manuscript Accepted: August 8, 2013
Published: September 4, 2013

Citation
Jennifer Nguyen, Carole K. Hayakawa, Judith R. Mourant, and Jerome Spanier, "Perturbation Monte Carlo methods for tissue structure alterations," Biomed. Opt. Express 4, 1946-1963 (2013)
http://www.opticsinfobase.org/boe/abstract.cfm?URI=boe-4-10-1946


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