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Scanning thin-sheet laser imaging microscopy (sTSLIM) with structured illumination and HiLo background rejection. |
Biomedical Optics Express, Vol. 3, Issue 1, pp. 170-177 (2012)
http://dx.doi.org/10.1364/BOE.3.000170
Acrobat PDF (1311 KB)
Abstract
We report replacement of one side of a static illumination, dual sided, thin-sheet laser imaging microscope (TSLIM) with an intensity modulated laser scanner in order to implement structured illumination (SI) and HiLo image demodulation techniques for background rejection. The new system is equipped with one static and one scanned light-sheet and is called a scanning thin-sheet laser imaging microscope (sTSLIM). It is an optimized version of a light-sheet fluorescent microscope that is designed to image large specimens (<15 mm in diameter). In this paper we describe the hardware and software modifications to TSLIM that allow for static and uniform light-sheet illumination with SI and HiLo image demodulation. The static light-sheet has a thickness of 3.2 µm; whereas, the scanned side has a light-sheet thickness of 4.2 µm. The scanned side images specimens with subcellular resolution (<1 µm lateral and <4 µm axial resolution) with a size up to 15 mm. SI and HiLo produce superior contrast compared to both the uniform static and scanned light-sheets. HiLo contrast was greater than SI and is faster and more robust than SI because as it produces images in two-thirds of the time and exhibits fewer intensity streaking artifacts.
© 2011 OSA
1. Introduction
P. A. Santi, S. B. Johnson, M. Hillenbrand, P. Z. GrandPre, T. J. Glass, and J. R. Leger, “Thin-sheet laser imaging microscopy for optical sectioning of thick tissues,” Biotechniques 46(4), 287–294 (2009). [PubMed]
M. A. A. Neil, R. Juskaitis, and T. Wilson, “Method of obtaining optical sectioning by using structured light in a conventional microscope,” Opt. Lett. 22(24), 1905–1907 (1997). [CrossRef] [PubMed]
J. Mertz and J. Kim, “Scanning light-sheet microscopy in the whole mouse brain with HiLo background rejection,” J. Biomed. Opt. 15(1), 016027 (2010). [CrossRef] [PubMed]
P. J. Keller and E. H. Stelzer, “Quantitative in vivo imaging of entire embryos with digital scanned laser light sheet fluorescence microscopy,” Curr. Opin. Neurobiol. 18(6), 624–632 (2008). [CrossRef] [PubMed]
P. J. Keller, A. D. Schmidt, A. Santella, K. Khairy, Z. Bao, J. Wittbrodt, and E. H. Stelzer, “Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy,” Nat. Methods 7(8), 637–642 (2010). [CrossRef] [PubMed]
2. Methods and results
P. A. Santi, S. B. Johnson, M. Hillenbrand, P. Z. GrandPre, T. J. Glass, and J. R. Leger, “Thin-sheet laser imaging microscopy for optical sectioning of thick tissues,” Biotechniques 46(4), 287–294 (2009). [PubMed]
P. Schacht, S. B. Johnson, and P. A. Santi, “Implementation of a continuous scanning procedure and a line scan camera for thin-sheet laser imaging microscopy,” Biomed. Opt. Express 1(2), 598–609 (2010). [CrossRef] [PubMed]
J. A. N. Buytaert and J. J. J. Dirckx, “Design and quantitative resolution measurements of an optical virtual sectioning three-dimensional imaging technique for biomedical specimens, featuring two-micrometer slicing resolution,” J. Biomed. Opt. 12(1), 014039 (2007). [CrossRef] [PubMed]
P. J. Keller, A. D. Schmidt, A. Santella, K. Khairy, Z. Bao, J. Wittbrodt, and E. H. Stelzer, “Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy,” Nat. Methods 7(8), 637–642 (2010). [CrossRef] [PubMed]
P. J. Keller, A. D. Schmidt, A. Santella, K. Khairy, Z. Bao, J. Wittbrodt, and E. H. Stelzer, “Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy,” Nat. Methods 7(8), 637–642 (2010). [CrossRef] [PubMed]
2.1. Programming the control of sTSLIM
2.2. Image demodulation techniques
| Method | Structured Illumination | HiLo Background Rejection |
|---|---|---|
| Application | • minimum three phase shifts grid illumination required | • two images, one with a pattern illumination and one with a uniform illumination |
| • phase control of the grid pattern (0°, 120° and 240° phase), more phase shifts are possible | • low pattern quality necessary | |
| • high accuracy for phase shift required | • grid, or speckled for pattern illumination possible | |
| • high grid quality required | • robust algorithm against pattern failure | |
| • simple algorithm for image post processing | • complicated algorithm required | |
| Speed | minimum three images | two images |
| Energy Load (photobeaching/phototoxicity) | minimum three images with 50% intensity ≥150% intensity | one image with 100% + 1 image with 50% = 150% intensity |
| Publications | [2 M. A. A. Neil, R. Juskaitis, and T. Wilson, “Method of obtaining optical sectioning by using structured light in a conventional microscope,” Opt. Lett. 22(24), 1905–1907 (1997). [CrossRef] [PubMed] P. J. Keller, A. D. Schmidt, A. Santella, K. Khairy, Z. Bao, J. Wittbrodt, and E. H. Stelzer, “Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy,” Nat. Methods 7(8), 637–642 (2010). [CrossRef] [PubMed] L. H. Schaefer, D. Schuster, and J. Schaffer, “Structured illumination microscopy: artefact analysis and reduction utilizing a parameter optimization approach,” J. Microsc. 216(2), 165–174 (2004). [CrossRef] [PubMed] | [3 J. Mertz and J. Kim, “Scanning light-sheet microscopy in the whole mouse brain with HiLo background rejection,” J. Biomed. Opt. 15(1), 016027 (2010). [CrossRef] [PubMed] J. A. N. Buytaert and J. J. J. Dirckx, “Design and quantitative resolution measurements of an optical virtual sectioning three-dimensional imaging technique for biomedical specimens, featuring two-micrometer slicing resolution,” J. Biomed. Opt. 12(1), 014039 (2007). [CrossRef] [PubMed] L. H. Schaefer, D. Schuster, and J. Schaffer, “Structured illumination microscopy: artefact analysis and reduction utilizing a parameter optimization approach,” J. Microsc. 216(2), 165–174 (2004). [CrossRef] [PubMed] |
L. H. Schaefer, D. Schuster, and J. Schaffer, “Structured illumination microscopy: artefact analysis and reduction utilizing a parameter optimization approach,” J. Microsc. 216(2), 165–174 (2004). [CrossRef] [PubMed]
P. J. Keller, A. D. Schmidt, A. Santella, K. Khairy, Z. Bao, J. Wittbrodt, and E. H. Stelzer, “Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy,” Nat. Methods 7(8), 637–642 (2010). [CrossRef] [PubMed]
P. J. Keller, A. D. Schmidt, A. Santella, K. Khairy, Z. Bao, J. Wittbrodt, and E. H. Stelzer, “Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy,” Nat. Methods 7(8), 637–642 (2010). [CrossRef] [PubMed]
3. Conclusions
Acknowledgments
References and links
P. A. Santi, S. B. Johnson, M. Hillenbrand, P. Z. GrandPre, T. J. Glass, and J. R. Leger, “Thin-sheet laser imaging microscopy for optical sectioning of thick tissues,” Biotechniques 46(4), 287–294 (2009). [PubMed] | |
M. A. A. Neil, R. Juskaitis, and T. Wilson, “Method of obtaining optical sectioning by using structured light in a conventional microscope,” Opt. Lett. 22(24), 1905–1907 (1997). [CrossRef] [PubMed] | |
J. Mertz and J. Kim, “Scanning light-sheet microscopy in the whole mouse brain with HiLo background rejection,” J. Biomed. Opt. 15(1), 016027 (2010). [CrossRef] [PubMed] | |
P. J. Keller and E. H. Stelzer, “Quantitative in vivo imaging of entire embryos with digital scanned laser light sheet fluorescence microscopy,” Curr. Opin. Neurobiol. 18(6), 624–632 (2008). [CrossRef] [PubMed] | |
P. J. Keller, A. D. Schmidt, A. Santella, K. Khairy, Z. Bao, J. Wittbrodt, and E. H. Stelzer, “Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy,” Nat. Methods 7(8), 637–642 (2010). [CrossRef] [PubMed] | |
P. Schacht, S. B. Johnson, and P. A. Santi, “Implementation of a continuous scanning procedure and a line scan camera for thin-sheet laser imaging microscopy,” Biomed. Opt. Express 1(2), 598–609 (2010). [CrossRef] [PubMed] | |
J. A. N. Buytaert and J. J. J. Dirckx, “Design and quantitative resolution measurements of an optical virtual sectioning three-dimensional imaging technique for biomedical specimens, featuring two-micrometer slicing resolution,” J. Biomed. Opt. 12(1), 014039 (2007). [CrossRef] [PubMed] | |
L. H. Schaefer, D. Schuster, and J. Schaffer, “Structured illumination microscopy: artefact analysis and reduction utilizing a parameter optimization approach,” J. Microsc. 216(2), 165–174 (2004). [CrossRef] [PubMed] |
OCIS Codes
(170.3880) Medical optics and biotechnology : Medical and biological imaging
(180.0180) Microscopy : Microscopy
(180.2520) Microscopy : Fluorescence microscopy
(180.6900) Microscopy : Three-dimensional microscopy
(220.0220) Optical design and fabrication : Optical design and fabrication
ToC Category:
Microscopy
History
Original Manuscript: September 27, 2011
Revised Manuscript: December 8, 2011
Manuscript Accepted: December 15, 2011
Published: December 19, 2011
Citation
Tobias J. Schröter, Shane B. Johnson, Kerstin John, and Peter A. Santi, "Scanning thin-sheet laser imaging microscopy (sTSLIM) with structured illumination and HiLo background rejection.," Biomed. Opt. Express 3, 170-177 (2012)
http://www.opticsinfobase.org/boe/abstract.cfm?URI=boe-3-1-170
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References
- P. A. Santi, S. B. Johnson, M. Hillenbrand, P. Z. GrandPre, T. J. Glass, and J. R. Leger, “Thin-sheet laser imaging microscopy for optical sectioning of thick tissues,” Biotechniques46(4), 287–294 (2009). [PubMed]
- M. A. A. Neil, R. Juskaitis, and T. Wilson, “Method of obtaining optical sectioning by using structured light in a conventional microscope,” Opt. Lett.22(24), 1905–1907 (1997). [CrossRef] [PubMed]
- J. Mertz and J. Kim, “Scanning light-sheet microscopy in the whole mouse brain with HiLo background rejection,” J. Biomed. Opt.15(1), 016027 (2010). [CrossRef] [PubMed]
- P. J. Keller and E. H. Stelzer, “Quantitative in vivo imaging of entire embryos with digital scanned laser light sheet fluorescence microscopy,” Curr. Opin. Neurobiol.18(6), 624–632 (2008). [CrossRef] [PubMed]
- P. J. Keller, A. D. Schmidt, A. Santella, K. Khairy, Z. Bao, J. Wittbrodt, and E. H. Stelzer, “Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy,” Nat. Methods7(8), 637–642 (2010). [CrossRef] [PubMed]
- P. Schacht, S. B. Johnson, and P. A. Santi, “Implementation of a continuous scanning procedure and a line scan camera for thin-sheet laser imaging microscopy,” Biomed. Opt. Express1(2), 598–609 (2010). [CrossRef] [PubMed]
- J. A. N. Buytaert and J. J. J. Dirckx, “Design and quantitative resolution measurements of an optical virtual sectioning three-dimensional imaging technique for biomedical specimens, featuring two-micrometer slicing resolution,” J. Biomed. Opt.12(1), 014039 (2007). [CrossRef] [PubMed]
- L. H. Schaefer, D. Schuster, and J. Schaffer, “Structured illumination microscopy: artefact analysis and reduction utilizing a parameter optimization approach,” J. Microsc.216(2), 165–174 (2004). [CrossRef] [PubMed]
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