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Optics Express

Optics Express

  • Editor: C. Martijn de Sterke
  • Vol. 18, Iss. 14 — Jul. 5, 2010
  • pp: 14730–14744

Robust segmentation of intraretinal layers in the normal human fovea using a novel statistical model based on texture and shape analysis

Vedran Kajić, Boris Považay, Boris Hermann, Bernd Hofer, David Marshall, Paul L. Rosin, and Wolfgang Drexler  »View Author Affiliations


Optics Express, Vol. 18, Issue 14, pp. 14730-14744 (2010)
http://dx.doi.org/10.1364/OE.18.014730


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Abstract

A novel statistical model based on texture and shape for fully automatic intraretinal layer segmentation of normal retinal tomograms obtained by a commercial 800nm optical coherence tomography (OCT) system is developed. While existing algorithms often fail dramatically due to strong speckle noise, non-optimal imaging conditions, shadows and other artefacts, the novel algorithm’s accuracy only slowly deteriorates when progressively increasing segmentation task difficulty. Evaluation against a large set of manual segmentations shows unprecedented robustness, even in the presence of additional strong speckle noise, with dynamic range tested down to 12dB, enabling segmentation of almost all intraretinal layers in cases previously inaccessible to the existing algorithms. For the first time, an error measure is computed from a large, representative manually segmented data set (466 B-scans from 17 eyes, segmented twice by different operators) and compared to the automatic segmentation with a difference of only 2.6% against the inter-observer variability.

© 2010 OSA

OCIS Codes
(100.0100) Image processing : Image processing
(170.4500) Medical optics and biotechnology : Optical coherence tomography
(170.4580) Medical optics and biotechnology : Optical diagnostics for medicine
(100.3008) Image processing : Image recognition, algorithms and filters

ToC Category:
Medical Optics and Biotechnology

History
Original Manuscript: May 14, 2010
Revised Manuscript: June 20, 2010
Manuscript Accepted: June 21, 2010
Published: June 24, 2010

Virtual Issues
Vol. 5, Iss. 11 Virtual Journal for Biomedical Optics

Citation
Vedran Kajić, Boris Považay, Boris Hermann, Bernd Hofer, David Marshall, Paul L. Rosin, and Wolfgang Drexler, "Robust segmentation of intraretinal layers in the normal human fovea using a novel statistical model based on texture and shape analysis," Opt. Express 18, 14730-14744 (2010)
http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-18-14-14730


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