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Using a quartz paraboloid for versatile wide-field TIR microscopy with sub-nanometer localization accuracyRené Schneider, Tilman Glaser, Michael Berndt, and Stefan Diez »View Author Affiliations
René Schneider,1,2
Tilman Glaser,3
Michael Berndt,1
and Stefan Diez1,2,*
1Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstraße 108, 01307 Dresden, Germany 2B CUBE - Center for Molecular Bioengineering, Technische Universität Dresden, Arnoldstraße 18, 01307 Dresden, Germany 3Carl Zeiss Jena GmbH, Carl-Zeiss-Promenade 10, 07745 Jena, Germany *Corresponding author: diez@bcube-dresden.de |
Optics Express, Vol. 21, Issue 3, pp. 3523-3539 (2013)
http://dx.doi.org/10.1364/OE.21.003523
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Abstract
Illumination based on objective-type total internal reflection (TIR) is nowadays widely used in high-performance fluorescence microscopy. However, the desirable application of such setups for dark-field imaging of scattering entities is cumbersome due to the spatial overlap of illumination and detection light, which cannot be separated spectrally. Here, we report a novel TIR approach based on a parabolically shaped quartz prism that allows for the detection of single-molecule fluorescence as well as single-particle scattering with high signal-to-noise ratios. We demonstrate homogeneous and spatially invariant illumination profiles in combination with a convenient control over a wide range of illumination angles. Moreover, we quantitatively compare the fluorescence performance of our setup to objective-type TIR and demonstrate sub-nanometer localization accuracies for the scattering of 40 nm gold nanoparticles (AuNPs). When bound to individual kinesin-1 motors, the AuNPs reliably report on the characteristic 8 nm stepping along microtubules.
© 2013 OSA
OCIS Codes
(110.0180) Imaging systems : Microscopy
(180.2520) Microscopy : Fluorescence microscopy
(260.6970) Physical optics : Total internal reflection
(290.5850) Scattering : Scattering, particles
(110.2945) Imaging systems : Illumination design
ToC Category:
Microscopy
History
Original Manuscript: January 14, 2013
Revised Manuscript: January 14, 2013
Manuscript Accepted: January 21, 2013
Published: February 5, 2013
Virtual Issues
Vol. 8, Iss. 3 Virtual Journal for Biomedical Optics
Citation
René Schneider, Tilman Glaser, Michael Berndt, and Stefan Diez, "Using a quartz paraboloid for versatile wide-field TIR microscopy with sub-nanometer localization accuracy," Opt. Express 21, 3523-3539 (2013)
http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-21-3-3523
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References
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- K. R. Rogers, S. Weiss, I. Crevel, P. J. Brophy, M. Geeves, and R. Cross, “KIF1D is a fast non-processive kinesin that demonstrates novel K-loop-dependent mechanochemistry,” EMBO J.20(18), 5101–5113 (2001). [CrossRef] [PubMed]
- C. Gell, V. Bormuth, G. J. Brouhard, D. N. Cohen, S. Diez, C. T. Friel, J. Helenius, B. Nitzsche, H. Petzold, J. Ribbe, E. Schäffer, J. H. Stear, A. Trushko, V. Varga, P. O. Widlund, M. Zanic, and J. Howard, “Microtubule dynamics reconstituted in vitro and imaged by single-molecule fluorescence microscopy,” Methods Cell Biol.95, 221–245 (2010). [CrossRef] [PubMed]
- C. Gell, M. Berndt, J. Enderlein, and S. Diez, “TIRF microscopy evanescent field calibration using tilted fluorescent microtubules,” J. Microsc.234(1), 38–46 (2009). [CrossRef] [PubMed]
- T. Lang, I. Wacker, J. Steyer, C. Kaether, I. Wunderlich, T. Soldati, H. H. Gerdes, and W. Almers, “Ca2+-triggered peptide secretion in single cells imaged with green fluorescent protein and evanescent-wave microscopy,” Neuron18(6), 857–863 (1997). [CrossRef] [PubMed]
- W. P. Ambrose, P. M. Goodwin, and J. P. Nolan, “Single-molecule detection with total internal reflection excitation: Comparing signal-to-background and total signals in different geometries,” Cytometry36(3), 224–231 (1999). [CrossRef] [PubMed]
- U. Resch-Genger, M. Grabolle, S. Cavaliere-Jaricot, R. Nitschke, and T. Nann, “Quantum dots versus organic dyes as fluorescent labels,” Nat. Methods5(9), 763–775 (2008). [CrossRef] [PubMed]
- C. Joo, H. Balci, Y. Ishitsuka, C. Buranachai, and T. Ha, “Advances in single-molecule fluorescence methods for molecular biology,” Annu. Rev. Biochem.77(1), 51–76 (2008). [CrossRef] [PubMed]
- X. Wang, X. Ren, K. Kahen, M. A. Hahn, M. Rajeswaran, S. Maccagnano-Zacher, J. Silcox, G. E. Cragg, A. L. Efros, and T. D. Krauss, “Non-blinking semiconductor nanocrystals,” Nature459(7247), 686–689 (2009). [CrossRef] [PubMed]
- W. Haiss, N. T. K. Thanh, J. Aveyard, and D. G. Fernig, “Determination of Size and Concentration of Gold Nanoparticles from UV-Vis Spectra,” Anal. Chem.79(11), 4215–4221 (2007). [CrossRef] [PubMed]
- C. Gell, V. Bormuth, G. J. Brouhard, D. N. Cohen, S. Diez, C. T. Friel, J. Helenius, B. Nitzsche, H. Petzold, J. Ribbe, E. Schäffer, J. H. Stear, A. Trushko, V. Varga, P. O. Widlund, M. Zanic, and J. Howard, “Microtubule dynamics reconstituted in vitro and imaged by single-molecule fluorescence microscopy,” Methods Cell Biol.95, 221–245 (2010). [CrossRef] [PubMed]
- E. Lassila, T. Alahautala, and R. Hernberg, “Focusing diode lasers using a truncated paraboloid with spherical output surface,” Opt. Eng.46(5), 054301 (2007). [CrossRef]
- R. Swaminathan, C. P. Hoang, and A. S. Verkman, “Photobleaching recovery and anisotropy decay of green fluorescent protein GFP-S65T in solution and cells: Cytoplasmic viscosity probed by green fluorescent protein translational and rotational diffusion,” Biophys. J.72(4), 1900–1907 (1997). [CrossRef] [PubMed]
- C. Gell, V. Bormuth, G. J. Brouhard, D. N. Cohen, S. Diez, C. T. Friel, J. Helenius, B. Nitzsche, H. Petzold, J. Ribbe, E. Schäffer, J. H. Stear, A. Trushko, V. Varga, P. O. Widlund, M. Zanic, and J. Howard, “Microtubule dynamics reconstituted in vitro and imaged by single-molecule fluorescence microscopy,” Methods Cell Biol.95, 221–245 (2010). [CrossRef] [PubMed]
- H. Ueno, S. Nishikawa, R. Iino, K. V. Tabata, S. Sakakihara, T. Yanagida, and H. Noji, “Simple dark-field microscopy with nanometer spatial precision and microsecond temporal resolution,” Biophys. J.98(9), 2014–2023 (2010). [CrossRef] [PubMed]
- C. Joo, H. Balci, Y. Ishitsuka, C. Buranachai, and T. Ha, “Advances in single-molecule fluorescence methods for molecular biology,” Annu. Rev. Biochem.77(1), 51–76 (2008). [CrossRef] [PubMed]
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Ann. Phys-Berlin
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