OSA's Digital Library

Optics Express

Optics Express

  • Editor: C. Martijn de Sterke
  • Vol. 18, Iss. 20 — Sep. 27, 2010
  • pp: 21003–21012

Rapid volumetric OCT image acquisition using Compressive Sampling

Evgeniy Lebed, Paul J. Mackenzie, Marinko V. Sarunic, and Mirza Faisal Beg  »View Author Affiliations


Optics Express, Vol. 18, Issue 20, pp. 21003-21012 (2010)
http://dx.doi.org/10.1364/OE.18.021003


View Full Text Article

Enhanced HTML    Acrobat PDF (5379 KB)





Browse Journals / Lookup Meetings

Browse by Journal and Year


   


Lookup Conference Papers

Close Browse Journals / Lookup Meetings

Article Tools

Share
Citations

Abstract

Acquiring three dimensional image volumes with techniques such as Optical Coherence Tomography (OCT) relies on reconstructing the tissue layers based on reflection of light from tissue interfaces. One B-mode scan in an image is acquired by scanning and concatenating several A-mode scans, and several contiguous slices are acquired to assemble a full 3D image volume. In this work, we demonstrate how Compressive Sampling (CS) can be used to accurately reconstruct 3D OCT images with minimal quality degradation from a subset of the original image. The full 3D image is reconstructed from sparsely sampled data by exploiting the sparsity of the image in a carefully chosen transform domain. We use several sub-sampling schemes, recover the full 3D image using CS, and show that there is negligible effect on clinically relevant morphometric measurements of the optic nerve head in the recovered image. The potential outcome of this work is a significant reduction in OCT image acquisition time, with possible extensions to speeding up acquisition in other imaging modalities such as ultrasound and MRI.

© 2010 Optical Society of America

OCIS Codes
(100.2000) Image processing : Digital image processing
(100.3010) Image processing : Image reconstruction techniques

ToC Category:
Image Processing

History
Original Manuscript: May 27, 2010
Revised Manuscript: July 2, 2010
Manuscript Accepted: July 9, 2010
Published: September 20, 2010

Virtual Issues
Vol. 5, Iss. 14 Virtual Journal for Biomedical Optics

Citation
Evgeniy Lebed, Paul J. Mackenzie, Marinko V. Sarunic, and Faisal M. Beg, "Rapid Volumetric OCT Image Acquisition Using Compressive Sampling," Opt. Express 18, 21003-21012 (2010)
http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-18-20-21003


Sort:  Author  |  Year  |  Journal  |  Reset  

References

  1. B. Považay, B. Hofer, C. Torti, B. Hermann, A. R. Tumlinson, M. Esmaeelpour, C. A. Egan, A. C. Bird, and W. Drexler, “Impact of enhanced resolution, speed and penetration on three-dimensional retinal optical coherence tomography,” Opt. Express 17, 4134–4150 (2009), http://www.opticsexpress.org/abstract.cfm?URI=oe-17-5-4134. [CrossRef] [PubMed]
  2. T. Schmoll, C. Kolbitsch, and R. A. Leitgeb, “Ultra-high-speed volumetric tomography of human retinal blood flow,” Opt. Express 17, 4166–4176 (2009), http://www.opticsexpress.org/abstract.cfm?URI=oe-17-5-4166.
  3. M. K. K. Leung, A. Mariampillai, B. A. Standish, K. K. C. Lee, N. R. Munce, A. Vitkin, and V. X. D. Yang, “High-power wavelength-swept laser in Littman telescope-less polygon filter and dual amplifier configuration for multichannel optical coherence tomography,” Opt. Lett. 34, 2814–2816 (2009), http://ol.osa.org/abstract.cfm?URI=ol-34-18-2814. [CrossRef] [PubMed]
  4. S. Mallat, A Wavelet Tour of Signal Processing, Second Edition (Academic Press, New York, 1999).
  5. E. J. Candès, and D. L. Donoho, “New tight frames of curvelets and optimal representations of objects with piecewise-C2 singularities,” Comm. Pure Appl. Math. 57, 219–266 (2004), http://www.acm.caltech.edu/emmanuel/papers/CurveEdges.pdf. [CrossRef]
  6. E. J. Candès, J. Romberg, and T. Tao, “Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information,” IEEE Trans. Inf. Theory 52, 489–509 (2006). [CrossRef]
  7. D. L. Donoho, “Compressed sensing,” IEEE Trans. Inf. Theory 52, 1289–1306 (2006). [CrossRef]
  8. E. Candès, and J. Romberg, “Sparsity and incoherence in compressive sampling,” Inverse Probl. 23, 969–985 (2007), http://stacks.iop.org/0266-5611/23/969. [CrossRef]
  9. I. Daubechies, M. Defrise, and C. De Mol, “An iterative thresholding algorithm for linear inverse problems with a sparsity constraint,” Comm. Pure Appl. Math. 11, 1413–1457 (2004), http://dx.doi.org/10.1002/cpa.20042. [CrossRef]
  10. F. J. Herrmann, and G. Hennenfent, “Non-parametric seismic data recovery with curvelet frames,” Geophys. J. Int. 173, 233–248 (2008). [CrossRef]
  11. M. Holschneider, R. Kronland-Martinet, J. Morlet, and P. Tchamitchian, Wavelets, Time-Frequency Methods and Phase Space (Springer-Verlag, Berlin, 1989).
  12. M. Elad, J. L. Starck, P. Querre, and D. L. Donoho, “Simultaneous cartoon and texture image inpainting using morphological component analysis (MCA),” Appl. Comput. Harmon. Anal. 19, 340–358 (2005), http://www.sciencedirect.com/science/article/B6WB3-4GWC29F-2/2/61d7afc314d50b27968d84ff4a16acce. [CrossRef]
  13. M. Young, S. Lee, E. Gibson, K. Hsu, M. F. Beg, P. J. Mackenzie, and M. V. Sarunic, “Morphometric analysis of the optic nerve head with optical coherence tomography.” In proceedings of OCT and Coherence Domain Optical Methods in Biomedicine XIV 7554, (2004), http://link.aip.org/link/?PSI/7554/75542L/1.
  14. B. C. Chauhan, J. W. Blanchard, D. C. Hamilton, and R. P. LeBlanc, “Technique for Detecting Serial Topographic Changes in the Optic Disc and Peripapillary Retina Using Scanning Laser Tomography,” Invest. Ophthalmol. Vis. Sci. 41, 775–782 (2000). [PubMed]

Cited By

Alert me when this paper is cited

OSA is able to provide readers links to articles that cite this paper by participating in CrossRef's Cited-By Linking service. CrossRef includes content from more than 3000 publishers and societies. In addition to listing OSA journal articles that cite this paper, citing articles from other participating publishers will also be listed.


« Previous Article  |  Next Article »

OSA is a member of CrossRef.

CrossCheck Deposited