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1. D. Sayre, H. N. Chapman, and J. Miao, “On the extendibility of x-ray crystallography to noncrystals,” Acta Crystallogr., Sect. A: Found. Crystallogr. 54, 323–239 (1998). [CrossRef]
2. J. Miao, Charalambous, J. Kirz, and D. Sayre, “Extending the methodology of x-ray crystallography to allow imaging of micrometre-sized non-crystalline specimens,” Nature 400, 342–344 (1999). [CrossRef]
3. R. Neutze, R. Wouts, D. van der Spoel, E. Weckert, and J. Hajdu, “Potential for biomolecular imaging with femtosecond x-ray pulses,” Nature 406, 753–757 (2000). [CrossRef]
4. S. Marchesini, H. Chapman, S. P. Hau-Riege, R. A. London, A. Szoke, H. He, M. R. Howells, H. Padmore, R. Rosen, J. C. H. Spence, and U. Weierstall, “Coherent x-ray diffractive imaging: applications and limitations,” Opt. Express 11, 2344–2353 (2003). [CrossRef] [PubMed]
5. J. Miao, D. Sayre, and H. N. Chapman, “Phase retrieval from the magnitude of the Fourier transforms of nonperiodic objects,” J. Opt. Soc. Am. A 15, 1662–1669 (1998). [CrossRef]
6. I. Robinson, I. Vartanyants, G. Williams, M.A. Pfeifer, and J. Pitney, “Reconstruction of the shapes of gold nanocrystals using coherent x-ray diffraction,” Phy. Rev. Lett. 87(19), 195505 (2001). [CrossRef]
7. J. Miao, T. Ishkawa, B. Johnson, E. H. Anderson, B. Lai, and K. O. Ohodgson, “High resoluton 3D x-ray diffraction microscopy,” Phys. Rev. Lett. 89, 088302 (2002). [CrossRef]
8. J. C. H. Spence, U. Weierstall, and M. Howells, “Phase recovery and lensless imaging by iterative methods in optical x-ray and electron diffraction,” PPhilos. Trans. R. Soc. London, Ser. A 360, 875–895 (2002). [CrossRef]
9. Y. Nishino, J. Miao, and T. Ishikawa, “Image reconstruction of nanostructured nonperiodic objects only from oversampled hard x-ray diffraction intensities,” Phys. Rev. B 68, 220101 (2003). [CrossRef]
10. S. Marchesini, H. He, H. N. Chapman, S. Hau-Riege, A. Noy, M. R. Howells, U. Weierstall, and J. C. H. Spence, “X-ray image reconstruction from a diffraction pattern alone,” Phy. Rev. B 68, 140101 (2003). [CrossRef]
11. G. Williams, M. A. Pfeifer, I. Vartanyants, and I. Robinson, “Three-dimensional imaging of microstructure in au nanocrystals,” Phys. Rev. Lett. 90, 195505 (2003).
12. G. Huldt, A. Szoke, and J. Hajdu, “Diffraction imaging of single particles and biomolecules,” J. Struct. Biol. 144, 219–227 (2003). [CrossRef] [PubMed]
13. S. Hau-Riege, H. Szoke, H. N. Chapman, A. Szoke, S. Marchesini, A. Noy, H. He, M. Howells, U. Weierstall, and J. C. H. Spence, “Speden: reconstructing single particles from their diffraction patterns,” Acta Crystallogr. Sect. A: Found. Crystallogr. 60, 294–305 (2004). [CrossRef]
14. D. Shapir, P. Thibault, T. Beetz, V. Elser, M. Howells, C. Jacobsen, J. Kirz, E. Lima, H. Miao, A. M. Neiman, and D. Sayre, “Biological imaging by soft x-ray diffraction microscopy,” Proc. Natl. Acad. Sci. U.S.A. 102(43), 15343–15346 (2005). [CrossRef]
15. H. N. Chapman, A. Barty, S. Marchesini, A. Noy, S. P. Hau-Riege, C. Cui, M. R. Howells, R. Rosen, H. He, J. C. H. Spence, U. Weierstall, T. Beetz, C. Jacobsen, and D. Shapiro, “High-resolution ab initio three-dimensional x-ray diffraction microscopy,” J. Opt. Soc. Am. A 23, 1179–1200 (2006). [CrossRef]
16. H. N. Chapman, S. Bajt, A. Barty, W. H. Benner, M. J. Bogan, M. Frank, S. P. Hau-Riege, R. A. London, S. Marchesini, E. Spiller, A. Szke, and B. W. Woods, “Ultrafast coherent diffraction imaging with x-ray free-electron lasers,” Proc. FEL , 805–811 (2006).
17. J. M. Rodenburg, A. C. Hurst, A. G. Cullis, B. R. Dobson, F. Pfeiffer, O. Bunk, C. David, K. Jefimovs, and I. Johnson, “Hard x-ray lensless imaging of extended objects,” Phy. Rev. Lett. 98, 034801 (2007). [CrossRef]
18. C. Song, H. Jiang, A. Mancuso, B. Amirbekian, L. Peng, R. Sun, S. S. Shah, Z. H. Zhou, T. Ishikawa, and J. Miao, “Quantitative imaging of single, unstained viruses with coherent x rays,” Phys. Rev. Lett. 101, 158101 (2008). [CrossRef] [PubMed]
19. M. M. Seibert, T. Ekeberg, F. R. N. C. Maia, M. Svenda, J. Andreasson, O. Jonsson, D. Odic, B. Iwan, A. Rocker, D. Westphal, M. Hantke, D. P. DePonte, A. Barty, J. Schulz, L. Gumprecht, N. Coppola, A. Aquila, M. Liang, T. A. White, A. Martin, C. Caleman, S. Stern, C. Abergel, V. Seltzer, and J.-M. Claverie, “Single mimivirus particles intercepted and imaged with an x-ray laser,” Nature 470, 78–81 (2011). [CrossRef] [PubMed]
20. G. Bortel and G. Faigel, “Classification of continuous diffraction patterns: a numerical study,” J. Struct. Biol. 158, 10–18 (2007). [CrossRef]
21. N.-T. D. Loh and V. Elser, “Reconstruction algorithm for single-particle diffraction imaging experiments,” Phy. Rev. E 80, 026705 (2009). [CrossRef]
22. R. Fung, V. Shneerson, D. K. Saldin, and A. Ourmazd, “Structure from fleeting illumination of faint spinning objects in flight,” Nat. Phys. 5, 64–67 (2009). [CrossRef]
23. D. K. Saldin, V. L. Shneerson, R. Fung, and A. Ourmazd, “Structure of isolated biomolecules obtained from ultrashort x-ray pulses: exploiting the symmetry of random orientations,” J. Phys.: Condens. Matter 21, 134014 (2009). [CrossRef]
24. M. van Heel, “Angular reconstruction: a posteriori assignment of projection directions for 3d reconstruction,” Ultramicroscopy 21, 111–124 (1987). [CrossRef] [PubMed]
25. N. A. Farrow and F. P. Ottensmeyer, “A posteriori determination of relative projection directions of arbitrarily oriented macromolecules,” J. Opt. Soc. Am. A 9, 1749–1760 (1992). [CrossRef]
26. M. van Heel, “Single-particle electron cryo-microscopy: towards atomic resolution,” Q. Rev. Biophys. 33, 307–369 (2000). [CrossRef]
27. R. Miles, “On random rotations in r3,” Biometrika 52, 636–639 (1965).
28. J. Lipfert, D. Herschlag, and S. Doniach, “Riboswitch conformations revealed by small-angle x-ray scattering,” Methods Mol. Biol. 540, 141–159 (2009). [CrossRef] [PubMed]

Acta Crystallogr. Sect. A: Found. Crystallogr.

• S. Hau-Riege, H. Szoke, H. N. Chapman, A. Szoke, S. Marchesini, A. Noy, H. He, M. Howells, U. Weierstall, and J. C. H. Spence, “Speden: reconstructing single particles from their diffraction patterns,” Acta Crystallogr. Sect. A: Found. Crystallogr. 60, 294–305 (2004). [CrossRef]

Acta Crystallogr., Sect. A: Found. Crystallogr.

• D. Sayre, H. N. Chapman, and J. Miao, “On the extendibility of x-ray crystallography to noncrystals,” Acta Crystallogr., Sect. A: Found. Crystallogr. 54, 323–239 (1998). [CrossRef]

Biometrika

• R. Miles, “On random rotations in r3,” Biometrika 52, 636–639 (1965).

J. Opt. Soc. Am. A

• N. A. Farrow and F. P. Ottensmeyer, “A posteriori determination of relative projection directions of arbitrarily oriented macromolecules,” J. Opt. Soc. Am. A 9, 1749–1760 (1992). [CrossRef]
• J. Miao, D. Sayre, and H. N. Chapman, “Phase retrieval from the magnitude of the Fourier transforms of nonperiodic objects,” J. Opt. Soc. Am. A 15, 1662–1669 (1998). [CrossRef]
• H. N. Chapman, A. Barty, S. Marchesini, A. Noy, S. P. Hau-Riege, C. Cui, M. R. Howells, R. Rosen, H. He, J. C. H. Spence, U. Weierstall, T. Beetz, C. Jacobsen, and D. Shapiro, “High-resolution ab initio three-dimensional x-ray diffraction microscopy,” J. Opt. Soc. Am. A 23, 1179–1200 (2006). [CrossRef]

J. Phys.: Condens. Matter

• D. K. Saldin, V. L. Shneerson, R. Fung, and A. Ourmazd, “Structure of isolated biomolecules obtained from ultrashort x-ray pulses: exploiting the symmetry of random orientations,” J. Phys.: Condens. Matter 21, 134014 (2009). [CrossRef]

J. Struct. Biol.

• G. Bortel and G. Faigel, “Classification of continuous diffraction patterns: a numerical study,” J. Struct. Biol. 158, 10–18 (2007). [CrossRef]
• G. Huldt, A. Szoke, and J. Hajdu, “Diffraction imaging of single particles and biomolecules,” J. Struct. Biol. 144, 219–227 (2003). [CrossRef] [PubMed]

Methods Mol. Biol.

• J. Lipfert, D. Herschlag, and S. Doniach, “Riboswitch conformations revealed by small-angle x-ray scattering,” Methods Mol. Biol. 540, 141–159 (2009). [CrossRef] [PubMed]

Nat. Phys.

• R. Fung, V. Shneerson, D. K. Saldin, and A. Ourmazd, “Structure from fleeting illumination of faint spinning objects in flight,” Nat. Phys. 5, 64–67 (2009). [CrossRef]

Nature

• M. M. Seibert, T. Ekeberg, F. R. N. C. Maia, M. Svenda, J. Andreasson, O. Jonsson, D. Odic, B. Iwan, A. Rocker, D. Westphal, M. Hantke, D. P. DePonte, A. Barty, J. Schulz, L. Gumprecht, N. Coppola, A. Aquila, M. Liang, T. A. White, A. Martin, C. Caleman, S. Stern, C. Abergel, V. Seltzer, and J.-M. Claverie, “Single mimivirus particles intercepted and imaged with an x-ray laser,” Nature 470, 78–81 (2011). [CrossRef] [PubMed]
• J. Miao, Charalambous, J. Kirz, and D. Sayre, “Extending the methodology of x-ray crystallography to allow imaging of micrometre-sized non-crystalline specimens,” Nature 400, 342–344 (1999). [CrossRef]
• R. Neutze, R. Wouts, D. van der Spoel, E. Weckert, and J. Hajdu, “Potential for biomolecular imaging with femtosecond x-ray pulses,” Nature 406, 753–757 (2000). [CrossRef]

Opt. Express

• S. Marchesini, H. Chapman, S. P. Hau-Riege, R. A. London, A. Szoke, H. He, M. R. Howells, H. Padmore, R. Rosen, J. C. H. Spence, and U. Weierstall, “Coherent x-ray diffractive imaging: applications and limitations,” Opt. Express 11, 2344–2353 (2003). [CrossRef] [PubMed]

Phy. Rev. B

• S. Marchesini, H. He, H. N. Chapman, S. Hau-Riege, A. Noy, M. R. Howells, U. Weierstall, and J. C. H. Spence, “X-ray image reconstruction from a diffraction pattern alone,” Phy. Rev. B 68, 140101 (2003). [CrossRef]

Phy. Rev. E

• N.-T. D. Loh and V. Elser, “Reconstruction algorithm for single-particle diffraction imaging experiments,” Phy. Rev. E 80, 026705 (2009). [CrossRef]

Phy. Rev. Lett.

• J. M. Rodenburg, A. C. Hurst, A. G. Cullis, B. R. Dobson, F. Pfeiffer, O. Bunk, C. David, K. Jefimovs, and I. Johnson, “Hard x-ray lensless imaging of extended objects,” Phy. Rev. Lett. 98, 034801 (2007). [CrossRef]
• I. Robinson, I. Vartanyants, G. Williams, M.A. Pfeifer, and J. Pitney, “Reconstruction of the shapes of gold nanocrystals using coherent x-ray diffraction,” Phy. Rev. Lett. 87(19), 195505 (2001). [CrossRef]

Phys. Rev. B

• Y. Nishino, J. Miao, and T. Ishikawa, “Image reconstruction of nanostructured nonperiodic objects only from oversampled hard x-ray diffraction intensities,” Phys. Rev. B 68, 220101 (2003). [CrossRef]

Phys. Rev. Lett.

• G. Williams, M. A. Pfeifer, I. Vartanyants, and I. Robinson, “Three-dimensional imaging of microstructure in au nanocrystals,” Phys. Rev. Lett. 90, 195505 (2003).
• J. Miao, T. Ishkawa, B. Johnson, E. H. Anderson, B. Lai, and K. O. Ohodgson, “High resoluton 3D x-ray diffraction microscopy,” Phys. Rev. Lett. 89, 088302 (2002). [CrossRef]
• C. Song, H. Jiang, A. Mancuso, B. Amirbekian, L. Peng, R. Sun, S. S. Shah, Z. H. Zhou, T. Ishikawa, and J. Miao, “Quantitative imaging of single, unstained viruses with coherent x rays,” Phys. Rev. Lett. 101, 158101 (2008). [CrossRef] [PubMed]

PPhilos. Trans. R. Soc. London, Ser. A

• J. C. H. Spence, U. Weierstall, and M. Howells, “Phase recovery and lensless imaging by iterative methods in optical x-ray and electron diffraction,” PPhilos. Trans. R. Soc. London, Ser. A 360, 875–895 (2002). [CrossRef]

Proc. FEL

• H. N. Chapman, S. Bajt, A. Barty, W. H. Benner, M. J. Bogan, M. Frank, S. P. Hau-Riege, R. A. London, S. Marchesini, E. Spiller, A. Szke, and B. W. Woods, “Ultrafast coherent diffraction imaging with x-ray free-electron lasers,” Proc. FEL , 805–811 (2006).

Proc. Natl. Acad. Sci. U.S.A.

• D. Shapir, P. Thibault, T. Beetz, V. Elser, M. Howells, C. Jacobsen, J. Kirz, E. Lima, H. Miao, A. M. Neiman, and D. Sayre, “Biological imaging by soft x-ray diffraction microscopy,” Proc. Natl. Acad. Sci. U.S.A. 102(43), 15343–15346 (2005). [CrossRef]

Q. Rev. Biophys.

• M. van Heel, “Single-particle electron cryo-microscopy: towards atomic resolution,” Q. Rev. Biophys. 33, 307–369 (2000). [CrossRef]

Ultramicroscopy

• M. van Heel, “Angular reconstruction: a posteriori assignment of projection directions for 3d reconstruction,” Ultramicroscopy 21, 111–124 (1987). [CrossRef] [PubMed]

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