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Virtual Journal for Biomedical Optics

Virtual Journal for Biomedical Optics

| EXPLORING THE INTERFACE OF LIGHT AND BIOMEDICINE

  • Editors: Andrew Dunn and Anthony Durkin
  • Vol. 8, Iss. 9 — Oct. 2, 2013

Optimizing Savitzky-Golay Parameters for Improving Spectral Resolution and Quantification in Infrared Spectroscopy

Boris Zimmermann and Achim Kohler

Applied Spectroscopy, Vol. 67, Issue 8, pp. 892-902 (2013)


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Abstract

Calculating derivatives of spectral data by the Savitzky-Golay (SG) numerical algorithm is often used as a preliminary preprocessing step to resolve overlapping signals, enhance signal properties, and suppress unwanted spectral features that arise due to nonideal instrument and sample properties. Addressing these issues, a study of the simulated and measured infrared data by partial least-squares regression has been conducted. The simulated data sets were modeled by considering a range of undesired chemical and physical spectral anomalies and variations that can occur in a measured spectrum, such as baseline variations, noise, and scattering effects. The study has demonstrated the importance of the optimization of the SG parameters during the conversion of spectra into derivative form, specifically window size and polynomial order of the fitting curve. A specific optimal window size is associated with an exact component of the system being estimated, and this window size does not necessarily apply for some other component present in the system. Since the optimization procedure can be time-consuming, as a rough guideline spectral noise level can be used for assessment of window size. Moreover, it has been demonstrated that, when the extended multiplicative signal correction (EMSC) is used alongside the SG procedure, the derivative treatment of data by the SG algorithm must precede the EMSC normalization.

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Vol. 8, Iss. 9 Virtual Journal for Biomedical Optics

Citation
Boris Zimmermann and Achim Kohler, "Optimizing Savitzky-Golay Parameters for Improving Spectral Resolution and Quantification in Infrared Spectroscopy," Appl. Spectrosc. 67, 892-902 (2013)
http://www.opticsinfobase.org/vjbo/abstract.cfm?URI=as-67-8-892


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