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Virtual Journal for Biomedical Optics

Virtual Journal for Biomedical Optics

| EXPLORING THE INTERFACE OF LIGHT AND BIOMEDICINE

  • Editor: Gregory W. Faris
  • Vol. 5, Iss. 1 — Jan. 4, 2010

High throughput transmission optical projection tomography using low cost graphics processing unit

Claudio Vinegoni, Lyuba Fexon, Paolo Fumene Feruglio, Misha Pivovarov, Jose-Luiz Figueiredo, Matthias Nahrendorf, Antonio Pozzo, Andrea Sbarbati, and Ralph Weissleder  »View Author Affiliations


Optics Express, Vol. 17, Issue 25, pp. 22320-22332 (2009)
http://dx.doi.org/10.1364/OE.17.022320


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Abstract

We implement the use of a graphics processing unit (GPU) in order to achieve real time data processing for high-throughput transmission optical projection tomography imaging. By implementing the GPU we have obtained a 300 fold performance enhancement in comparison to a CPU workstation implementation. This enables to obtain on-the-fly reconstructions enabling for high throughput imaging.

© 2009 OSA

OCIS Codes
(170.0110) Medical optics and biotechnology : Imaging systems
(170.0170) Medical optics and biotechnology : Medical optics and biotechnology
(170.3880) Medical optics and biotechnology : Medical and biological imaging

ToC Category:
Medical Optics and Biotechnology

History
Original Manuscript: August 25, 2009
Revised Manuscript: October 21, 2009
Manuscript Accepted: October 25, 2009
Published: November 23, 2009

Virtual Issues
Vol. 5, Iss. 1 Virtual Journal for Biomedical Optics

Citation
Claudio Vinegoni, Lyuba Fexon, Paolo Fumene Feruglio, Misha Pivovarov, Jose-Luiz Figueiredo, Matthias Nahrendorf, Antonio Pozzo, Andrea Sbarbati, and Ralph Weissleder, "High throughput transmission optical projection tomography using low cost graphics processing unit," Opt. Express 17, 22320-22332 (2009)
http://www.opticsinfobase.org/vjbo/abstract.cfm?URI=oe-17-25-22320


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