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Virtual Journal for Biomedical Optics

Virtual Journal for Biomedical Optics

| EXPLORING THE INTERFACE OF LIGHT AND BIOMEDICINE

  • Editor: Gregory W. Faris
  • Vol. 5, Iss. 3 — Feb. 10, 2010

Generalized Jones matrix optical coherence tomography: performance and local birefringence imaging

Shuichi Makita, Masahiro Yamanari, and Yoshiaki Yasuno  »View Author Affiliations


Optics Express, Vol. 18, Issue 2, pp. 854-876 (2010)
http://dx.doi.org/10.1364/OE.18.000854


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Abstract

Phase retardation imaging including local birefringence imaging of biological tissues is described by generalized Jones-matrix optical coherence tomography. The polarization properties of a local tissue can be obtained from two Jones matrices that are measured by backscattered lights from the front and back boundaries of the local tissue. The error in the phase retardation measurement due to background noise is analyzed theoretically, numerically, and experimentally. The minimum detectable phase retardation is estimated from numerical simulations. The theoretical analysis suggests that the measurements with two orthogonal input polarization states have the lowest retardation error. Local birefringence imaging is applied to the human anterior eye chamber and skin in vivo.

© 2010 Optical Society of America

OCIS Codes
(120.5410) Instrumentation, measurement, and metrology : Polarimetry
(170.1870) Medical optics and biotechnology : Dermatology
(170.4470) Medical optics and biotechnology : Ophthalmology
(170.4500) Medical optics and biotechnology : Optical coherence tomography
(260.1440) Physical optics : Birefringence
(260.5430) Physical optics : Polarization

ToC Category:
Medical Optics and Biotechnology

History
Original Manuscript: October 22, 2009
Revised Manuscript: December 21, 2009
Manuscript Accepted: December 23, 2009
Published: January 6, 2010

Virtual Issues
Vol. 5, Iss. 3 Virtual Journal for Biomedical Optics

Citation
Shuichi Makita, Masahiro Yamanari, and Yoshiaki Yasuno, "Generalized Jones matrix optical coherence tomography: performance and local birefringence imaging," Opt. Express 18, 854-876 (2010)
http://www.opticsinfobase.org/vjbo/abstract.cfm?URI=oe-18-2-854


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References

  1. D. Huang, E. A. Swanson, C. P. Lin, J. S. Schuman, W. G. Stinson, W. Chang, M. R. Hee, T. Flotte, K. Gregory, C. A. Puliafito, and J. G. Fujimoto, "Optical coherence tomography," Science 254, 1178-1181 (1991). [CrossRef] [PubMed]
  2. J. S. Schuman, M. R. Hee, C. A. Puliafito, C. Wong, T. Pedut-Kloizman, C. P. Lin, E. Hertzmark, J. A. Izatt, E. A. Swanson, and J. G. Fujimoto, "Quantification of nerve fiber layer thickness in normal and glaucomatous eyes using optical coherence tomography," Arch. Ophthalmol. 113, 586-596 (1995). [PubMed]
  3. G. J. Tearney, M. E. Brezinski, S. A. Boppart, B. E. Bouma, N. Weissman, J. F. Southern, E. A. Swanson, and J. G. Fujimoto, "Images in cardiovascular medicine. Catheter-based optical imaging of a human coronary artery," Circulation 94, 3013 (1996). [PubMed]
  4. J. Welzel, E. Lankenau, R. Birngruber, and R. Engelhardt, "Optical coherence tomography of the human skin," J. Am. Acad. Dermatol. 37, 958-963 (1997). [CrossRef]
  5. M. R. Hee, D. Huang, E. A. Swanson, and J. G. Fujimoto, "Polarization-sensitive low-coherence reflectometer for birefringence characterization and ranging," J. Opt. Soc. Am. B 9, 903-908 (1992). [CrossRef]
  6. B. Cense, T. C. Chen, B. H. Park, M. C. Pierce, and J. F. de Boer, "Thickness and birefringence of healthy retinal nerve fiber layer tissue measured with polarization-sensitive optical coherence tomography," Invest. Ophthalmol. Vis. Sci. 45, 2606-2612 (2004). [CrossRef] [PubMed]
  7. M. Yamanari, M. Miura, S. Makita, T. Yatagai, and Y. Yasuno, "Phase retardation measurement of retinal nerve fiber layer by polarization-sensitive spectral-domain optical coherence tomography and scanning laser polarimetry," J. Biomed. Opt. 13, 014013 (2008). [CrossRef] [PubMed]
  8. E. Götzinger, M. Pircher, B. Baumann, C. Hirn, C. Vass, and C. K. Hitzenberger, "Retinal nerve fiber layer birefringence evaluated with polarization sensitive spectral domain OCT and scanning laser polarimetry: A comparison," J. Biophoton. 1, 129-139 (2008). [CrossRef]
  9. S. D. Giattina, B. K. Courtney, P. R. Herz, M. Harman, S. Shortkroff, D. L. Stamper, B. Liu, J. G. Fujimoto, and M. E. Brezinski, "Assessment of coronary plaque collagen with polarization sensitive optical coherence tomography (PS-OCT)," Int. J. Cardiol. 107, 400-409 (2006). [CrossRef] [PubMed]
  10. S. K. Nadkarni, M. C. Pierce, B. H. Park, J. F. de Boer, P. Whittaker, B. E. Bouma, J. E. Bressner, E. Halpern, S. L. Houser, and G. J. Tearney, "Measurement of Collagen and Smooth Muscle Cell Content in Atherosclerotic Plaques Using Polarization-Sensitive Optical Coherence Tomography," J. Am. Coll. Cardiol. 49, 1474-1481 (2007). [CrossRef] [PubMed]
  11. S. Guo, J. Zhang, L. Wang, J. S. Nelson, and Z. Chen, "Depth-resolved birefringence and differential optical axis orientation measurements with fiber-based polarization-sensitive optical coherence tomography," Opt. Lett. 29, 2025-2027 (2004). [CrossRef] [PubMed]
  12. M. Todorović, S. Jiao, L. V. Wang, and G. Stoica, "Determination of local polarization properties of biological samples in the presence of diattenuation by use of Mueller optical coherence tomography," Opt. Lett. 29, 2402-2404 (2004). [CrossRef] [PubMed]
  13. N. Kemp, H. Zaatari, J. Park, H. G. R.III, and T. Milner, "Depth-resolved optic axis orientation in multiple layered anisotropic tissues measured with enhanced polarization-sensitive optical coherence tomography (EPSOCT)," Opt. Express 13, 4507-4518 (2005). URL http://www.opticsexpress.org/abstract.cfm?URI=oe-13-12-4507. [CrossRef] [PubMed]
  14. S. Makita, Y. Yasuno, T. Endo, M. Itoh, and T. Yatagai, "Polarization contrast imaging of biological tissues by polarization-sensitive Fourier-domain optical coherence tomography," Appl. Opt. 45, 1142-1147 (2006). [CrossRef] [PubMed]
  15. S. Jiao, G. Yao, and L. V. Wang, "Depth-Resolved Two-Dimensional Stokes Vectors of Backscattered Light and Mueller Matrices of Biological Tissue Measured With Optical Coherence Tomography," Appl. Opt. 39, 6318-6324 (2000). [CrossRef]
  16. B. H. Park, M. C. Pierce, B. Cense, and J. F. de Boer, "Jones matrix analysis for a polarization-sensitive optical coherence tomography system using fiber-optic components," Opt. Lett. 29, 2512-2514 (2004). [CrossRef] [PubMed]
  17. S. Jiao and L. V. Wang, "Jones-matrix imaging of biological tissues with quadruple-channel optical coherence tomography," J. Biomed. Opt. 7, 350-358 (2002). [CrossRef] [PubMed]
  18. S.-Y. Lu and R. A. Chipman, "Homogeneous and inhomogeneous Jones matrices," J. Opt. Soc. Am. A 11, 766 (1994). [CrossRef]
  19. M. Yamanari, S. Makita, V. Madjarova, T. Yatagai, and Y. Yasuno, "Fiber-based polarization-sensitive Fourier domain optical coherence tomography using B-scan-oriented polarization modulation method," Opt. Express 14, 6502-6515 (2006). URL http://www.opticsexpress.org/abstract.cfm?id=90792. [CrossRef] [PubMed]
  20. S. Jiao, W. Yu, G. Stoica, and L. V. Wang, "Optical-fiber-based Mueller optical coherence tomography," Opt. Lett. 28, 1206-1208 (2003). [CrossRef] [PubMed]
  21. G. Strang, Introduction to linear algebra, 3rd ed. (Wellesley Cambridge Pr, 2003).
  22. N. Kemp, H. Zaatari, J. Park, H. G. R.III, and T. Milner, "Form-biattenuance in fibrous tissues measured with polarization-sensitive optical coherence tomography (PS-OCT)," Opt. Express  13, 4611-4628 (2005). URL http://www.opticsexpress.org/abstract.cfm?URI=oe-13-12-4611. [CrossRef] [PubMed]
  23. M. Everett, K. Schoenenberger, B. ColstonJr., and L. Da Silva, "Birefringence characterization of biological tissue by use of optical coherence tomography," Opt. Lett. 23, 228-230 (1998). [CrossRef]
  24. K. Schoenenberger, B. W. Colston, D. J. Maitland, L. B. D. Silva, and M. J. Everett, "Mapping of Birefringence and Thermal Damage in Tissue by use of Polarization-Sensitive Optical Coherence Tomography," Appl. Opt. 37, 6026-6036 (1998). [CrossRef]
  25. M. Yamanari, S. Makita, and Y. Yasuno, "Polarization-sensitive swept-source optical coherence tomography with continuous source polarization modulation," Opt. Express 16, 5892-5906 (2008). URL http://www. opticsexpress.org/abstract.cfm?URI=oe-16-8-5892. [CrossRef] [PubMed]
  26. S. Yazdanfar, C. Yang, M. Sarunic, and J. Izatt, "Frequency estimation precision in Doppler optical coherence tomography using the Cramer-Rao lower bound," Opt. Express 13, 410-416 (2005). URL http: //www.opticsexpress.org/abstract.cfm?URI=oe-13-2-410. [CrossRef] [PubMed]
  27. B. H. Park, M. C. Pierce, B. Cense, S.-H. Yun, M. Mujat, G. J. Tearney, B. E. Bouma, and J. F. de Boer, "Realtime fiber-based multi-functional spectral-domain optical coherence tomography at 1.3 μm," Opt. Express 13, 3931-3944 (2005). URL http://www.opticsexpress.org/abstract.cfm?id=84093. [CrossRef] [PubMed]
  28. B. H. Park, M. C. Pierce, B. Cense, and J. F. de Boer, "Optic axis determination accuracy for fiber-based polarization-sensitive optical coherence tomography," Opt. Lett. 30, 2587-2589 (2005). [CrossRef] [PubMed]
  29. Y. Yasuno, M. Yamanari, K. Kawana, T. Oshika, and M. Miura, "Investigation of post-glaucoma-surgery structures by three-dimensional and polarization sensitive anterior eye segment optical coherence tomography," Opt. Express 17, 3980-3996 (2009). URL http://www.opticsexpress.org/abstract.cfm?URI=oe-17-5-3980. [CrossRef] [PubMed]
  30. S. Sakai, N. Nakagawa, M. Yamanari, A. Miyazawa, Y. Yasuno, and M. Matsumoto, "Relationship between dermal birefringence and the skin surface roughness of photoaged human skin," J. Biomed. Opt. 14, 044032 (2009). [CrossRef] [PubMed]
  31. D. J. Maitland and J. T. W. Jr., "Quantitative measurements of linear birefringence during heating of native collagen," Lasers. Surg. Med. 20, 310-318 (1997). [CrossRef] [PubMed]
  32. A. Miyazawa, M. Yamanari, S. Makita, M. Miura, K. Kawana, K. Iwaya, H. Goto, and Y. Yasuno, "Tissue discrimination in anterior eye using three optical parameters obtained by polarization sensitive optical coherence tomography," Opt. Express 17, 17,426-17,440 (2009). URL http://www.opticsexpress.org/abstract.cfm?URI=oe-17-20-17426. [CrossRef]
  33. M. Miura, M. Yamanari, T. Iwasaki, A. E. Elsner, S. Makita, T. Yatagai, and Y. Yasuno, "Imaging Polarimetry in Age-Related Macular Degeneration," Invest. Ophthalmol. Vis. Sci. 49, 2661-2667 (2008). [CrossRef] [PubMed]
  34. C. E. Saxer, J. F. de Boer, B. H. Park, Y. Zhao, Z. Chen, and J. S. Nelson., "High-speed fiber based polarization sensitive optical coherence tomography of in vivo human skin," Opt. Lett. 25, 1355-1357 (2000). [CrossRef]
  35. M. C. Pierce, J. Strasswimmer, B. H. Park, B. Cense, and J. F. D. Boer, "Birefringence measurements in human skin using polarization-sensitive optical coherence tomography," J. Biomed. Opt. 9, 287-291 (2004). [CrossRef] [PubMed]
  36. W. Oh, S. Yun, B. Vakoc, M. Shishkov, A. Desjardins, B. Park, J. de Boer, G. Tearney, and B. Bouma, "High-speed polarization sensitive optical frequency domain imaging with frequency multiplexing," Opt. Express 16, 1096-1103 (2008). URL http://www.opticsexpress.org/abstract.cfm?URI=oe-16-2-1096. [CrossRef] [PubMed]
  37. M. Yamanari, Y. Lim, S. Makita, and Y. Yasuno, "Visualization of phase retardation of deep posterior eye by polarization-sensitive swept-source optical coherence tomography with1-μm probe," Opt. Express 17, 12,385-12,396 (2009). URL http://www.opticsexpress.org/abstract.cfm?URI=oe-17-15-12385. [CrossRef]

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